Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907548.1_cds_XP_016457658.1_51359
CDS Infomation

[gene=LOC107781472] [db_xref=GeneID:107781472] [protein=uncharacterized protein LOC107781472 isoform X2] [protein_id=XP_016457658.1] [location=complement(join(8531..8539,10794..10895,11335..11382,11499..11636,12126..12251,15939..16025,16137..16246,16341..16440,18945..19491,20530..20606,20768..20860,21004..21090,30962..31231))] [gbkey=CDS]
Sequence

ATGGAGGGCGGCGGTAGTGGCGGAGAATCGGTAGTAGGGAGGACATCGACGTCGTATGAG
GCTGCGGCCGGCCGGCGGAGGTTCACGGTAGAGCTCCGGCCGGGAGAAACCACAATTGTA
TCGTGGAAGAAGCTTCTCAAGGACGCTACTATCTCTCAGTCCAATGCTCCTAACGGTGCT
GGTCCTGCTCCAACAACATCGTCTGCAGCTGCTGCCGCTGTCATTCAACCTCCACTGCCA
CACCCTTCGCTCGAGACTCGATTAGCTTCGGGACAACCTGCTGATAAGGAAGTCAAGGAT
GCTCCTCCTGGAAATCGTTTAAATGCTGTGATCGAAAAGATTGAACGCCTATATGTGGGC
AAACAAAGTGATGACGAGGAAGATCTTAATGATTTCCCAGATGATGATGAATATGACACT
GAAGATTCTTTCATAGATGATACTGAGCTGGATGAGTATTTTCAGGTTGATAACTCAGCA
ATAAAGCATGACGGGTTCTTTGTCAATCGCGGAAAGTTGGAGCGCGTTGAACTAGTGTCA
CCAAAGAACCAGCAACCAAAAAAGCGGAGAAGAAAAGATCTGGCAAAAGGCCATGTTGGG
GACAATGATGGACATAGTCCAAGTAAACCTGTAAAAGTAGGAAAGAAGGCTGGCAAACCA
GTACCAGTTGTTATCGGATCTTCTCACCCATCTCATGGTGTCGCTTTGCAAAATGTATCC
CATGAAGGAGAAAAATTCCTGAATCAGTTGAATGCTTCTGAAATACCAATAACAAAGAAA
GCTGCAGATACCCAAAGTATGCTGGAGCAATCTCCATCAGTATCATTGCGTGGTGATTCT
GCACAAGAAAAAGACTTTGACCAGCAGAAAATTGGAGTTATCCAATCCAAGAATCTAGAT
GGTTCTGAAATATCTGGGAATTCTACTCAGAGGCATGACAAAAGTTCTTTTGCTCAAGAG
AGAACTGTTGTGGGAAGACCGGTTAACGTTTCTGACGGAGTAGACCAATCTGTTCAGCGA
CGTGATGAAAAGTTTAACGTCAGTGGTGAGGGCAAGAACTCAGTTCAGACTATGAAAGGT
CCTGCCATGCAGCGAAAGGAAGGATCTAGTGGTAGACCAAAAGGTACAATGCTTGAGAAG
GCCATCAGGGATTTGGAGAAAATTGTTGCAGAATCGAGGCCACCAAATATGGAGGTTCAG
GATGCTGATAATTCATCCCAGGCTATCAAAAGGAGGTTACCACCTGAAGTAAAGCAGAAG
CTGGCTAAAGTTGCCAGATTGGCGCAAGCTAGTCATGGAAAAATATCCCAGGACTTAATT
AATCGCTTAATGAGTATTGTTGGCCACTTGATACAACTTCGCACATTGAAGAGGAATTTG
AAAATCATGGTCAATATGGGACTGTCAGCAAAACAGGAGAAAGATAACAGGGTTCATCAA
ATAAAGAGGGAGGTCGCTGAGATGATTAAGTTGCGGATTCCATTAATGAAATCAAAGTTA
CTTGAGCAACAAGCTGGAGCTTCTGATGACTTCCAAGAAGCAAGTGCTGAAGAGAAAGAA
GCCTTTAAGAGAAAATACAGCATGGATGTTGCACTAGAAGACAAAATATGCGACCTTTAT
GATCATTTTGTTGAGGGGCTGGATGAAGATGCTGGTCCGCAAGTCAGAAAGTTGTATGCA
GAGCTTGCAGGATTTTGGCCAAATGGCTTTATGGACAATCATGGTATTAAACGTGCTATA
TGTAGAGCAAAAGACAGAAGGAGAGCATTGCACGCTCGGCGTAAGAGGGGCTGA

Peptide Sequence

PEP ID

XP_016457658.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107781472 isoform X2 [Nicotiana tabacum]
Sequence

MEGGGSGGESVVGRTSTSYEAAAGRRRFTVELRPGETTIVSWKKLLKDATISQSNAPNGA
GPAPTTSSAAAAAVIQPPLPHPSLETRLASGQPADKEVKDAPPGNRLNAVIEKIERLYVG
KQSDDEEDLNDFPDDDEYDTEDSFIDDTELDEYFQVDNSAIKHDGFFVNRGKLERVELVS
PKNQQPKKRRRKDLAKGHVGDNDGHSPSKPVKVGKKAGKPVPVVIGSSHPSHGVALQNVS
HEGEKFLNQLNASEIPITKKAADTQSMLEQSPSVSLRGDSAQEKDFDQQKIGVIQSKNLD
GSEISGNSTQRHDKSSFAQERTVVGRPVNVSDGVDQSVQRRDEKFNVSGEGKNSVQTMKG
PAMQRKEGSSGRPKGTMLEKAIRDLEKIVAESRPPNMEVQDADNSSQAIKRRLPPEVKQK
LAKVARLAQASHGKISQDLINRLMSIVGHLIQLRTLKRNLKIMVNMGLSAKQEKDNRVHQ
IKREVAEMIKLRIPLMKSKLLEQQAGASDDFQEASAEEKEAFKRKYSMDVALEDKICDLY
DHFVEGLDEDAGPQVRKLYAELAGFWPNGFMDNHGIKRAICRAKDRRRALHARRKRG

Transcript Sequence

Gene sequence data has not been registered.